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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015906381.1_cds_XP_016456565.1_50385
CDS Infomation

[gene=LOC107780525] [db_xref=GeneID:107780525] [protein=patatin-2-Kuras 1-like] [protein_id=XP_016456565.1] [location=join(9830..9997,10354..10535,10708..10870,10998..11159,12328..12630,13597..13739,13846..13903)] [gbkey=CDS]
Sequence

ATGGCAATTACTGGATCTTTTTTTATTTTATTTCTTTTGGTACTGACAACTACTGGATCA
ACATCTTCTGTGGTGGGAGAAATGGTGACTGTTCTTAGCATTGATGGAGGTGGCATTAAA
GGCATCATTCCTGCTATTGTTCTTTCATTTCTGGAAAGCGAACTCCAGGAATTAGACTGT
GATGAAGATGCAAGACTTGCAGATTACTTTGATGTGATTGCGGGAACAAGTACAGGTGGC
ATATTGACTACTATGATAAGTGCTCCAAATGAAAAGGGTCGTCCCTTCTCTGCTGCCAAA
GATATTGTATCCTTTTACTTCGACCATGGCCCTTGCATTTTTCCACCTGGGGCCTCGCCT
CCCTTTTTTGCCCCCAAATATGATGGAAAATATCTTCACAATGTTCTGCAAGAGAAGTTG
GGAGAGACTCGTTTGAATCAGACTTTAACAAATGTTGTCATTCCAACTTTTGACATGAAG
AAACTTCAGCCAATAATATTCACCAAGTCGGAGATAGCAAACTCTCCTCAATTGGATGCT
AAGTTGTCTGACATATGCATTGGTACCTCGGCAGCTCCAACTTATTTTCCTCCATATTAC
TTTGAGAATGATGATGGTAAAGGAAATAAGTATGAGTTTAATCTTATTGATGGTGGTGTT
GTTGCTGGCAATCCGGCCTTAATTGCCCTAAGCACAGTAATCAACAGTACGGAAACGGAT
CCATCATTTGCTTCTATCAAGCCAATGGACGACAAAAACATTCTGCTGCTCTCATTAGGG
ACTGGCACTATTGCAGATTTTGCTGGGAAATACACAGCAGAGGAGGCAGCTCATTGGGGT
CTTGTTTCCTGGCTATTTCATAATAATTCGAATCCTCTTAATGAAATGACATCTGCAGCA
AGTGCTATCATGAATGATTATTACATCACCACTATCTATCGCGCTCTTGGTGCTAAAATA
AATTACCTCAGAATTGAAGAAAACGCATTAACAGGCACAACTACCCAAATGGATAATGCT
ACAGAGGCTAATATGAACTTATTGGTACAAGTTGGTGAAAACTTGTTGAAGAAACCAGCT
TCCAATGGGAATCCAGAAACCAATGAGGAAGCTCTAAAGAGGTTTGCAAAATTGCTCTCA
GAAAGGAAGAAACTCCGAGCAAACAAAGCCTCTCAATAA

Peptide Sequence

PEP ID

XP_016456565.1
PEP Infomation

PREDICTED: patatin-2-Kuras 1-like [Nicotiana tabacum]
Sequence

MAITGSFFILFLLVLTTTGSTSSVVGEMVTVLSIDGGGIKGIIPAIVLSFLESELQELDC
DEDARLADYFDVIAGTSTGGILTTMISAPNEKGRPFSAAKDIVSFYFDHGPCIFPPGASP
PFFAPKYDGKYLHNVLQEKLGETRLNQTLTNVVIPTFDMKKLQPIIFTKSEIANSPQLDA
KLSDICIGTSAAPTYFPPYYFENDDGKGNKYEFNLIDGGVVAGNPALIALSTVINSTETD
PSFASIKPMDDKNILLLSLGTGTIADFAGKYTAEEAAHWGLVSWLFHNNSNPLNEMTSAA
SAIMNDYYITTIYRALGAKINYLRIEENALTGTTTQMDNATEANMNLLVQVGENLLKKPA
SNGNPETNEEALKRFAKLLSERKKLRANKASQ

Transcript Sequence

Gene sequence data has not been registered.